naphthalene+OCH3+SH C11H10OS
B_4bb8d4d301 · SMILES COc1ccc2ccc(S)cc2c1 · InChIKey ULEDLYNERQHGBR-UHFFFAOYSA-N
finite-difference Hessian noisy
finite-difference Hessian noisy (analytic check differs > 15 cm⁻¹). The finite-difference Hessian and the analytic Hessian of the same geometry differ by more than 15 cm⁻¹ on at least one frequency; the numerical route is the noisy one.Infrared spectrum at the cheap level (B3LYP/6-31G*, the pipeline's input)
How to read this
41 infrared-active bands (500–3500 cm⁻¹); the strongest at 1311 cm⁻¹ (7.6 µm), 275 km/mol.
cheap input (B3LYP): blue curve, sticks orange at the curve's peak scale. Lorentzian, FWHM 10 cm⁻¹; axis in km mol⁻¹ per cm⁻¹.
Band heights from the molecule's dipole derivatives and the same B3LYP Hessian as the listed positions (double harmonic).
Predicted spectrum (rung 3, the learned correction): computed by the pipeline, not drawn on this page; licensed for ring-ip, CH-stretch, CH-oop (decision 65).
How well is this shape known?
| measured on (ΔH network v1.3) | spectrum overlap cheap → corrected | height error cheap → corrected |
|---|---|---|
| 8 unseen simple aromatics (layer A), DFT stand-in for the higher level | 0.28 → 0.98 | 0.23 → 0.10 |
| 31 molecules of unseen scaffolds, DFT stand-in for the higher level | 0.37 → 0.97 | 0.51 → 0.24 |
| against coupled cluster | not measured for this version | |
Overlap: similarity of the two broadened spectra (1 = the same shape). Height error: relative error per band, weighted by height (0 = the same heights). "Corrected" is the learned correction on molecules it never saw; the pipeline serves it for the licensed families. Open: the dipole derivatives themselves are computed at the cheap level (on benzene they differ from coupled cluster by about 20 %).
Harmonic frequencies at the cheap level (deck v1: B3LYP and ωB97X, 6-31G*, at the B3LYP geometry)
63 vibrational modes; imaginary modes negative. Shift = ωB97X − B3LYP; height = B3LYP band height (km/mol).
The B3LYP bands are drawn in the spectrum above; the table adds their heights, the ωB97X positions and the shift.
| # | B3LYP (cm⁻¹) | height (km/mol) | ωB97X (cm⁻¹) | shift |
|---|---|---|---|---|
| 1 | 58.6 | 2.62 | 72.1 | +13.5 |
| 2 | 106.5 | 0.61 | 115.3 | +8.8 |
| 3 | 132.1 | 2.66 | 145.1 | +13.0 |
| 4 | 155.2 | 20.55 | 167.1 | +11.8 |
| 5 | 158.3 | 0.78 | 244.4 | +86.0 |
| 6 | 239.6 | 0.05 | 259.3 | +19.7 |
| 7 | 251.8 | 2.03 | 282.2 | +30.4 |
| 8 | 274.1 | 0.06 | 290.0 | +15.9 |
| 9 | 310.6 | 0.84 | 323.1 | +12.5 |
| 10 | 332.8 | 2.91 | 337.6 | +4.8 |
| 11 | 379.2 | 0.95 | 384.8 | +5.6 |
| 12 | 426.3 | 2.76 | 433.4 | +7.1 |
| 13 | 431.0 | 1.50 | 442.7 | +11.7 |
| 14 | 480.7 | 8.21 | 485.7 | +5.0 |
| 15 | 553.6 | 11.65 | 558.0 | +4.4 |
| 16 | 590.1 | 1.04 | 607.1 | +16.9 |
| 17 | 632.6 | 4.18 | 638.6 | +6.0 |
| 18 | 647.6 | 1.16 | 652.3 | +4.7 |
| 19 | 650.3 | 0.00 | 664.4 | +14.1 |
| 20 | 732.6 | 17.24 | 739.6 | +6.9 |
| 21 | 758.4 | 2.67 | 773.2 | +14.8 |
| 22 | 789.2 | 0.38 | 797.7 | +8.5 |
| 23 | 794.2 | 0.04 | 809.9 | +15.7 |
| 24 | 836.1 | 33.54 | 852.2 | +16.1 |
| 25 | 851.3 | 14.02 | 868.5 | +17.3 |
| 26 | 892.5 | 32.78 | 911.8 | +19.3 |
| 27 | 922.1 | 13.59 | 941.3 | +19.3 |
| 28 | 943.3 | 0.24 | 971.6 | +28.2 |
| 29 | 954.4 | 32.14 | 978.4 | +24.0 |
| 30 | 962.6 | 0.44 | 984.5 | +21.9 |
| 31 | 969.9 | 4.49 | 995.3 | +25.4 |
| 32 | 1081.0 | 50.69 | 1098.3 | +17.3 |
| 33 | 1112.4 | 21.00 | 1129.0 | +16.5 |
| 34 | 1173.5 | 34.72 | 1168.5 | -5.0 |
| 35 | 1183.7 | 0.70 | 1179.1 | -4.7 |
| 36 | 1192.1 | 1.47 | 1184.2 | -7.9 |
| 37 | 1208.1 | 81.25 | 1210.7 | +2.5 |
| 38 | 1218.1 | 19.25 | 1213.8 | -4.3 |
| 39 | 1270.7 | 36.84 | 1274.6 | +3.9 |
| 40 | 1297.6 | 50.72 | 1305.6 | +8.0 |
| 41 | 1310.8 | 274.92 | 1317.3 | +6.5 |
| 42 | 1375.7 | 3.75 | 1383.2 | +7.5 |
| 43 | 1404.9 | 26.25 | 1390.5 | -14.4 |
| 44 | 1422.3 | 4.69 | 1430.3 | +8.1 |
| 45 | 1474.9 | 13.56 | 1494.4 | +19.5 |
| 46 | 1496.0 | 19.88 | 1501.4 | +5.4 |
| 47 | 1511.9 | 2.72 | 1523.4 | +11.5 |
| 48 | 1522.8 | 5.23 | 1529.2 | +6.4 |
| 49 | 1535.0 | 49.02 | 1540.8 | +5.9 |
| 50 | 1565.7 | 107.46 | 1591.5 | +25.8 |
| 51 | 1615.3 | 5.38 | 1647.0 | +31.7 |
| 52 | 1655.3 | 22.06 | 1685.2 | +29.9 |
| 53 | 1684.3 | 210.81 | 1730.4 | +46.1 |
| 54 | 2692.6 | 11.83 | 2737.6 | +44.9 |
| 55 | 3025.3 | 72.39 | 3061.3 | +36.0 |
| 56 | 3084.7 | 44.55 | 3132.9 | +48.2 |
| 57 | 3156.1 | 29.27 | 3199.3 | +43.2 |
| 58 | 3180.2 | 1.47 | 3224.6 | +44.3 |
| 59 | 3182.9 | 16.59 | 3227.3 | +44.5 |
| 60 | 3184.4 | 10.79 | 3228.4 | +44.0 |
| 61 | 3202.2 | 15.38 | 3245.9 | +43.7 |
| 62 | 3204.6 | 6.26 | 3248.1 | +43.5 |
| 63 | 3228.5 | 12.72 | 3273.4 | +44.9 |
Second route
Analytic Hessian (pyscf, grid 99/590) against the corpus finite differences: b3lyp max |Δω| 2 cm⁻¹; wb97x max |Δω| 20 cm⁻¹.
Provenance
- Releases: none yet
- Entered the corpus as: cores with one or two substituents, enumerated from the parents (layer B)
- Run: ubuntu-32gb-hel1-18, 2026-09-29 18:02:22 → 2026-09-29 19:00:41, 3499 s, peak 4.33 GB, deck 9e27bf8e9348
- Imaginary modes: B3LYP 0, ωB97X 0
- Cheap-level band heights: dipole derivatives dipole_b3lyp_cphf.npz, Hessian hessian_b3lyp.npz
- Source files: corpus factory · manifest