Spectrum Atlas

naphthalene+CF3+CF3 C12H6F6

B_2fd95052b3 · SMILES FC(F)(F)c1ccc2c(C(F)(F)F)cccc2c1 · InChIKey VBPMOMFXDNYVEH-UHFFFAOYSA-N

Cheap level done
finite-difference Hessian noisyfinite-difference Hessian noisy (analytic check differs > 15 cm⁻¹). The finite-difference Hessian and the analytic Hessian of the same geometry differ by more than 15 cm⁻¹ on at least one frequency; the numerical route is the noisy one.

Infrared spectrum at the cheap level (B3LYP/6-31G*, the pipeline's input)

500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.05.0101520 wavenumber (cm⁻¹) 500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.05.0101520 wavenumber (cm⁻¹) 100020003000 3 µm5 µm10 µm 0.05.0101520 wavenumber (cm⁻¹)
cheap input (B3LYP) bands
How to read this

41 infrared-active bands (500–3500 cm⁻¹); the strongest at 1186 cm⁻¹ (8.4 µm), 303 km/mol.

cheap input (B3LYP): blue curve, sticks orange at the curve's peak scale. Lorentzian, FWHM 10 cm⁻¹; axis in km mol⁻¹ per cm⁻¹.

Band heights from the molecule's dipole derivatives and the same B3LYP Hessian as the listed positions (double harmonic).

Predicted spectrum (rung 3, the learned correction): computed by the pipeline, not drawn on this page; licensed for ring-ip, CH-stretch, CH-oop (decision 65).

How well is this shape known?
measured on (ΔH network v1.3)spectrum overlap
cheap → corrected
height error
cheap → corrected
8 unseen simple aromatics (layer A), DFT stand-in for the higher level0.28 → 0.980.23 → 0.10
31 molecules of unseen scaffolds, DFT stand-in for the higher level0.37 → 0.970.51 → 0.24
against coupled clusternot measured for this version

Overlap: similarity of the two broadened spectra (1 = the same shape). Height error: relative error per band, weighted by height (0 = the same heights). "Corrected" is the learned correction on molecules it never saw; the pipeline serves it for the licensed families. Open: the dipole derivatives themselves are computed at the cheap level (on benzene they differ from coupled cluster by about 20 %).

Harmonic frequencies at the cheap level (deck v1: B3LYP and ωB97X, 6-31G*, at the B3LYP geometry)

66 vibrational modes; imaginary modes negative. Shift = ωB97X − B3LYP; height = B3LYP band height (km/mol).

The B3LYP bands are drawn in the spectrum above; the table adds their heights, the ωB97X positions and the shift.

#B3LYP (cm⁻¹)height (km/mol)ωB97X (cm⁻¹)shift
128.40.0161.3+32.9
247.50.2168.9+21.4
361.60.2384.5+22.9
4108.30.07116.9+8.5
5109.90.77126.3+16.4
6179.31.03186.4+7.1
7180.80.94189.9+9.2
8204.60.03214.9+10.3
9264.42.25268.2+3.8
10322.61.64329.0+6.4
11326.10.08335.8+9.8
12331.83.43336.3+4.5
13373.50.62381.7+8.2
14398.12.05402.7+4.6
15435.41.27446.7+11.4
16461.24.27468.1+6.9
17500.00.00506.9+6.8
18517.35.52525.3+8.0
19541.72.00546.4+4.7
20552.53.35558.3+5.8
21564.91.45574.4+9.4
22587.01.07592.7+5.6
23616.021.94620.2+4.1
24652.90.00664.0+11.0
25665.95.58670.4+4.5
26681.00.62691.1+10.1
27737.613.70744.0+6.4
28743.83.23748.2+4.4
29770.99.00785.0+14.1
30818.530.94831.4+12.9
31836.13.85842.6+6.5
32840.59.94853.6+13.1
33906.510.60915.0+8.5
34919.827.22947.2+27.4
35947.90.32972.8+24.9
36961.40.72988.4+27.0
37990.33.451002.1+11.8
38993.856.351019.6+25.8
391090.070.271095.5+5.5
401103.943.011115.8+11.8
411166.724.641168.8+2.1
421175.7203.961196.1+20.4
431186.0302.501201.2+15.2
441194.5148.671204.1+9.6
451198.827.171211.0+12.3
461219.3194.381234.1+14.8
471231.063.111241.5+10.6
481244.23.981250.5+6.3
491296.8205.421307.6+10.8
501339.4209.431356.1+16.7
511341.7265.801361.4+19.7
521399.67.121403.0+3.4
531417.55.091426.0+8.6
541426.418.981434.7+8.3
551483.214.331500.6+17.4
561522.218.781540.8+18.6
571566.95.921597.5+30.6
581640.110.041673.1+33.0
591667.60.901697.2+29.6
601694.113.591737.6+43.5
613190.23.123233.2+43.0
623211.714.753254.0+42.4
633212.62.193255.2+42.6
643220.52.593263.7+43.2
653236.93.053280.4+43.5
663251.81.783295.5+43.7

Second route

Analytic Hessian (pyscf, grid 99/590) against the corpus finite differences: b3lyp max |Δω| 16 cm⁻¹; wb97x max |Δω| 7 cm⁻¹.

Provenance

  • Releases: none yet
  • Entered the corpus as: cores with one or two substituents, enumerated from the parents (layer B)
  • Run: ubuntu-32gb-hel1-18, 2026-09-29 06:06:35 → 2026-09-29 07:40:02, 5606 s, peak 6.17 GB, deck 9e27bf8e9348
  • Imaginary modes: B3LYP 0, ωB97X 0
  • Cheap-level band heights: dipole derivatives dipole_b3lyp_cphf.npz, Hessian hessian_b3lyp.npz
  • Source files: corpus factory · manifest