Spectrum Atlas

phenanthridine+NH2 C13H10N2

A2_34db2b4f50 · SMILES Nc1ccc2c(c1)ncc1ccccc12 · InChIKey APQODMSXQCBFHE-UHFFFAOYSA-N

Cheap level done analytic check agrees

Infrared spectrum at the cheap level (B3LYP/6-31G*, the pipeline's input)

500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.05.01015 wavenumber (cm⁻¹) 500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.05.01015 wavenumber (cm⁻¹) 100020003000 3 µm5 µm10 µm 0.05.01015 wavenumber (cm⁻¹)
cheap input (B3LYP) bands
How to read this

48 infrared-active bands (500–3500 cm⁻¹); the strongest at 606 cm⁻¹ (16.5 µm), 256 km/mol.

cheap input (B3LYP): blue curve, sticks orange at the curve's peak scale. Lorentzian, FWHM 10 cm⁻¹; axis in km mol⁻¹ per cm⁻¹.

Band heights from the molecule's dipole derivatives and the same B3LYP Hessian as the listed positions (double harmonic).

Predicted spectrum (rung 3, the learned correction): computed by the pipeline, not drawn on this page; licensed for ring-ip, CH-stretch, CH-oop (decision 65).

How well is this shape known?
measured on (ΔH network v1.3)spectrum overlap
cheap → corrected
height error
cheap → corrected
8 unseen simple aromatics (layer A), DFT stand-in for the higher level0.28 → 0.980.23 → 0.10
31 molecules of unseen scaffolds, DFT stand-in for the higher level0.37 → 0.970.51 → 0.24
against coupled clusternot measured for this version

Overlap: similarity of the two broadened spectra (1 = the same shape). Height error: relative error per band, weighted by height (0 = the same heights). "Corrected" is the learned correction on molecules it never saw; the pipeline serves it for the licensed families. Open: the dipole derivatives themselves are computed at the cheap level (on benzene they differ from coupled cluster by about 20 %).

Harmonic frequencies at the cheap level (deck v1: B3LYP and ωB97X, 6-31G*, at the B3LYP geometry)

69 vibrational modes; imaginary modes negative. Shift = ωB97X − B3LYP; height = B3LYP band height (km/mol).

The B3LYP bands are drawn in the spectrum above; the table adds their heights, the ωB97X positions and the shift.

#B3LYP (cm⁻¹)height (km/mol)ωB97X (cm⁻¹)shift
173.72.1484.7+11.0
2106.00.73118.0+12.1
3190.52.28201.9+11.4
4205.82.01212.5+6.7
5232.70.48240.9+8.2
6311.822.47334.4+22.5
7331.55.62342.9+11.4
8337.60.32343.8+6.1
9401.10.56406.3+5.1
10417.11.55427.4+10.3
11449.38.32454.1+4.8
12478.93.38483.9+5.1
13510.01.54515.0+5.1
14541.247.34549.8+8.6
15548.11.30558.7+10.5
16573.77.33578.2+4.5
17579.5168.65586.0+6.5
18605.8256.48616.9+11.1
19669.437.45685.9+16.4
20703.913.97709.1+5.2
21728.80.17743.5+14.6
22745.43.76752.1+6.7
23768.241.19778.2+10.0
24788.32.01795.8+7.4
25790.523.52802.4+11.9
26830.018.63848.3+18.4
27872.74.01885.7+12.9
28882.916.59897.2+14.3
29899.012.71908.0+8.9
30931.80.05963.6+31.9
31942.01.77967.0+24.9
32968.07.18984.7+16.7
33975.25.56993.3+18.1
34988.00.161019.6+31.7
351017.70.091025.9+8.2
361065.34.341073.2+7.8
371115.40.731119.0+3.5
381146.25.461155.0+8.8
391177.45.851176.1-1.3
401185.65.871186.8+1.2
411202.21.061206.6+4.4
421250.850.091246.7-4.1
431265.74.911269.5+3.8
441305.612.081311.5+5.9
451331.724.741327.2-4.5
461349.638.141360.0+10.4
471384.45.971376.3-8.2
481397.16.211391.0-6.0
491438.91.291448.8+9.8
501456.818.091467.0+10.3
511491.815.401508.5+16.7
521517.123.331537.7+20.6
531536.355.561557.2+20.9
541585.510.561614.4+28.9
551622.315.141656.5+34.2
561647.254.671679.0+31.7
571668.3130.451702.1+33.8
581678.013.521716.7+38.7
591697.1198.841724.7+27.6
603132.133.843177.8+45.8
613176.819.463221.1+44.4
623179.73.093223.1+43.4
633187.915.023231.6+43.7
643200.014.333244.1+44.1
653201.60.323246.5+44.9
663207.933.753251.5+43.6
673216.228.263260.4+44.3
683552.624.793600.6+47.9
693652.79.943702.0+49.3

Second route

Analytic Hessian (pyscf, grid 99/590) against the corpus finite differences: b3lyp max |Δω| 1 cm⁻¹; wb97x max |Δω| 6 cm⁻¹.

Provenance

  • Releases: layerA2_2026-09-23, layerA2_2026-09-23b, layerA2_2026-09-24
  • Entered the corpus as: substituted three- and four-ring cores, enumerated from the parents (layer A′) (layer A2)
  • Run: ubuntu-32gb-hel1-11, 2026-09-22 07:12:59 → 2026-09-22 08:35:34, 4954 s, peak 5.57 GB, deck 97ed2d67c66b
  • Imaginary modes: B3LYP 0, ωB97X 0
  • Cheap-level band heights: dipole derivatives dipole_b3lyp_cphf.npz, Hessian hessian_b3lyp.npz
  • Source files: corpus factory · manifest