Spectrum Atlas

phenanthridine+CH3 C14H11N

A2_1c29b66c9d · SMILES Cc1ccc2cnc3ccccc3c2c1 · InChIKey DWWFVBWGMXKEMS-UHFFFAOYSA-N

Cheap level done
analytic Hessianfinite-difference Hessian was noisy → release uses the analytic Hessian. The finite-difference Hessian and the analytic Hessian of the same geometry differ by more than 15 cm⁻¹ on at least one frequency; the numerical route is the noisy one. In the released training set this molecule carries the analytic Hessian instead of the finite-difference one.
imaginary mode healedimaginary mode healed by the analytic Hessian. The finite-difference Hessian showed an imaginary frequency that the analytic Hessian does not: numerical noise, not a saddle point.

Harmonic frequencies at the cheap level (deck v1: B3LYP and ωB97X, 6-31G*, at the B3LYP geometry)

72 vibrational modes; imaginary modes negative. Shift = ωB97X − B3LYP.

0500100015002000250030003500 wavenumber (cm⁻¹) 3 µm4 µm5 µm6 µm8 µm10 µm15 µm25 µm B3LYP ωB97X 0500100015002000250030003500 wavenumber (cm⁻¹) 3 µm4 µm5 µm6 µm8 µm10 µm15 µm25 µm B3LYP ωB97X 0100020003000 wavenumber (cm⁻¹) 3 µm5 µm10 µm20 µm B3LYP ωB97X

Band heights are not computed for this molecule yet (no dipole derivatives); positions only, at unit height. High wavenumbers on the left; the table below is the same data.

#B3LYP (cm⁻¹)ωB97X (cm⁻¹)shift
171.3-51.6-122.9
282.399.0+16.7
3101.1118.8+17.7
4180.1188.7+8.7
5191.4195.4+4.0
6250.2265.4+15.2
7295.9304.8+8.8
8339.4342.4+2.9
9407.4411.1+3.7
10432.0447.2+15.2
11442.5455.5+13.0
12460.3464.4+4.1
13486.2492.4+6.2
14519.2530.8+11.6
15543.3547.5+4.2
16585.6597.1+11.5
17617.6633.2+15.7
18637.3641.3+4.0
19696.5701.8+5.3
20733.7740.1+6.4
21734.0751.1+17.1
22778.9791.7+12.8
23792.3799.5+7.2
24807.2824.1+16.8
25826.8847.3+20.5
26886.0904.6+18.6
27890.0907.9+17.9
28893.4913.4+20.1
29915.7925.9+10.2
30947.1978.0+30.9
31958.3990.0+31.7
32974.71008.8+34.1
33991.81020.9+29.0
341017.21022.5+5.3
351060.01068.1+8.1
361066.61073.7+7.1
371075.51084.1+8.5
381132.71132.3-0.4
391178.81175.0-3.8
401185.61183.5-2.2
411214.51224.7+10.3
421228.61228.0-0.6
431261.91270.4+8.5
441279.31290.8+11.5
451311.41315.3+3.9
461328.51326.2-2.2
471372.21361.9-10.3
481401.21398.2-3.0
491437.31449.1+11.8
501443.51454.4+11.0
511457.51473.2+15.7
521461.31477.1+15.8
531506.01514.9+9.0
541513.21521.4+8.2
551522.71530.7+8.0
561549.41574.2+24.8
571572.41599.3+26.9
581620.71654.7+34.0
591649.21685.3+36.2
601668.11707.6+39.4
611678.51721.4+42.8
623043.33078.4+35.1
633094.83145.2+50.4
643129.33176.2+46.9
653134.73180.3+45.6
663176.93220.4+43.6
673185.23228.5+43.3
683193.53237.1+43.6
693195.33239.9+44.6
703202.33246.3+44.0
713213.13258.0+44.9
723219.43262.3+42.8

Second route

Analytic Hessian (pyscf, grid 99/590) against the corpus finite differences: b3lyp max |Δω| 1 cm⁻¹; wb97x max |Δω| 147 cm⁻¹.

Provenance

  • Releases: layerA2_2026-09-24
  • Entered the corpus as: substituted three- and four-ring cores, enumerated from the parents (layer A′) (layer A2)
  • Run: ubuntu-32gb-hel1-10, 2026-09-20 22:15:54 → 2026-09-20 23:41:38, 5143 s, peak 5.8 GB, deck 97ed2d67c66b
  • Imaginary modes: B3LYP 0, ωB97X 1
  • Source files: corpus factory · manifest