Spectrum Atlas

phenanthridine+SH C13H9NS

A2_198d828af1 · SMILES Sc1cccc2c1ncc1ccccc12 · InChIKey SAXCUMLURJDGNH-UHFFFAOYSA-N

Cheap level done analytic check agrees

Infrared spectrum at the cheap level (B3LYP/6-31G*, the pipeline's input)

500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.01.02.03.04.05.0 wavenumber (cm⁻¹) 500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.01.02.03.04.05.0 wavenumber (cm⁻¹) 100020003000 3 µm5 µm10 µm 0.01.02.03.04.05.0 wavenumber (cm⁻¹)
cheap input (B3LYP) bands
How to read this

49 infrared-active bands (500–3500 cm⁻¹); the strongest at 771 cm⁻¹ (13.0 µm), 81 km/mol.

cheap input (B3LYP): blue curve, sticks orange at the curve's peak scale. Lorentzian, FWHM 10 cm⁻¹; axis in km mol⁻¹ per cm⁻¹.

Band heights from the molecule's dipole derivatives and the same B3LYP Hessian as the listed positions (double harmonic).

Predicted spectrum (rung 3, the learned correction): computed by the pipeline, not drawn on this page; licensed for ring-ip, CH-stretch, CH-oop (decision 65).

How well is this shape known?
measured on (ΔH network v1.3)spectrum overlap
cheap → corrected
height error
cheap → corrected
8 unseen simple aromatics (layer A), DFT stand-in for the higher level0.28 → 0.980.23 → 0.10
31 molecules of unseen scaffolds, DFT stand-in for the higher level0.37 → 0.970.51 → 0.24
against coupled clusternot measured for this version

Overlap: similarity of the two broadened spectra (1 = the same shape). Height error: relative error per band, weighted by height (0 = the same heights). "Corrected" is the learned correction on molecules it never saw; the pipeline serves it for the licensed families. Open: the dipole derivatives themselves are computed at the cheap level (on benzene they differ from coupled cluster by about 20 %).

Harmonic frequencies at the cheap level (deck v1: B3LYP and ωB97X, 6-31G*, at the B3LYP geometry)

66 vibrational modes; imaginary modes negative. Shift = ωB97X − B3LYP; height = B3LYP band height (km/mol).

The B3LYP bands are drawn in the spectrum above; the table adds their heights, the ωB97X positions and the shift.

#B3LYP (cm⁻¹)height (km/mol)ωB97X (cm⁻¹)shift
164.00.0176.6+12.5
2102.20.55120.0+17.7
3174.80.03187.1+12.3
4183.32.66195.8+12.5
5238.90.07249.3+10.4
6263.82.07276.6+12.8
7275.32.55283.4+8.1
8349.425.54383.2+33.8
9384.32.29391.2+6.9
10421.50.01426.0+4.5
11422.60.05435.5+12.9
12487.81.18500.5+12.7
13497.46.61503.1+5.7
14505.60.14518.8+13.2
15533.26.99539.5+6.3
16580.10.31585.4+5.3
17594.23.10603.4+9.2
18613.82.73629.4+15.6
19656.39.64661.9+5.5
20731.65.43740.2+8.6
21742.21.07759.7+17.5
22770.981.01782.4+11.4
23773.30.01788.0+14.6
24805.26.92818.1+12.9
25828.61.67848.5+19.9
26850.02.66858.6+8.6
27879.80.49900.5+20.6
28892.70.44909.3+16.6
29893.82.47922.1+28.3
30920.562.14956.4+35.9
31941.92.83971.8+29.8
32961.42.29993.6+32.2
33972.63.231006.2+33.5
34993.90.051024.6+30.8
351050.511.351062.2+11.6
361071.015.081080.1+9.1
371110.53.111113.5+3.0
381151.117.581156.4+5.4
391186.51.251176.8-9.8
401198.40.721199.0+0.7
411223.13.301220.5-2.6
421245.211.831252.9+7.6
431272.09.971280.4+8.4
441296.14.341303.0+6.9
451325.54.781317.0-8.5
461373.214.661366.7-6.4
471392.36.251389.2-3.2
481417.60.841426.6+9.0
491441.71.871457.3+15.6
501491.412.591505.2+13.9
511498.837.731516.5+17.7
521527.611.811552.6+25.0
531578.934.381606.9+28.0
541622.26.341657.2+35.0
551642.37.601678.4+36.1
561650.323.471684.6+34.3
571671.814.131716.4+44.6
582642.650.212692.1+49.6
593144.524.573189.6+45.1
603184.33.843227.2+42.9
613189.82.943232.9+43.2
623193.215.583236.2+43.0
633204.120.183247.9+43.8
643209.410.393252.5+43.1
653215.315.573259.4+44.0
663226.823.883271.9+45.1

Second route

Analytic Hessian (pyscf, grid 99/590) against the corpus finite differences: b3lyp max |Δω| 1 cm⁻¹; wb97x max |Δω| 8 cm⁻¹.

Provenance

  • Releases: layerA2_2026-09-23, layerA2_2026-09-23b, layerA2_2026-09-24
  • Entered the corpus as: substituted three- and four-ring cores, enumerated from the parents (layer A′) (layer A2)
  • Run: ubuntu-32gb-hel1-10, 2026-09-20 18:04:39 → 2026-09-20 19:26:29, 4909 s, peak 5.65 GB, deck 97ed2d67c66b
  • Imaginary modes: B3LYP 0, ωB97X 0
  • Cheap-level band heights: dipole derivatives dipole_b3lyp_cphf.npz, Hessian hessian_b3lyp.npz
  • Source files: corpus factory · manifest