Spectrum Atlas

phenanthrene+CF3 C15H9F3

A2_187a20beab · SMILES FC(F)(F)c1ccc2ccc3ccccc3c2c1 · InChIKey HVTFZHUEAGOTKD-UHFFFAOYSA-N

Cheap level done
finite-difference Hessian noisyfinite-difference Hessian noisy (analytic check differs > 15 cm⁻¹). The finite-difference Hessian and the analytic Hessian of the same geometry differ by more than 15 cm⁻¹ on at least one frequency; the numerical route is the noisy one.

Infrared spectrum at the cheap level (B3LYP/6-31G*, the pipeline's input)

500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.05.01015 wavenumber (cm⁻¹) 500100015002000250030003500 3 µm4 µm5 µm6 µm8 µm10 µm15 µm 0.05.01015 wavenumber (cm⁻¹) 100020003000 3 µm5 µm10 µm 0.05.01015 wavenumber (cm⁻¹)
cheap input (B3LYP) bands
How to read this

44 infrared-active bands (500–3500 cm⁻¹); the strongest at 1182 cm⁻¹ (8.5 µm), 281 km/mol.

cheap input (B3LYP): blue curve, sticks orange at the curve's peak scale. Lorentzian, FWHM 10 cm⁻¹; axis in km mol⁻¹ per cm⁻¹.

Band heights from the molecule's dipole derivatives and the same B3LYP Hessian as the listed positions (double harmonic).

Predicted spectrum (rung 3, the learned correction): computed by the pipeline, not drawn on this page; licensed for ring-ip, CH-stretch, CH-oop (decision 65).

How well is this shape known?
measured on (ΔH network v1.3)spectrum overlap
cheap → corrected
height error
cheap → corrected
8 unseen simple aromatics (layer A), DFT stand-in for the higher level0.28 → 0.980.23 → 0.10
31 molecules of unseen scaffolds, DFT stand-in for the higher level0.37 → 0.970.51 → 0.24
against coupled clusternot measured for this version

Overlap: similarity of the two broadened spectra (1 = the same shape). Height error: relative error per band, weighted by height (0 = the same heights). "Corrected" is the learned correction on molecules it never saw; the pipeline serves it for the licensed families. Open: the dipole derivatives themselves are computed at the cheap level (on benzene they differ from coupled cluster by about 20 %).

Harmonic frequencies at the cheap level (deck v1: B3LYP and ωB97X, 6-31G*, at the B3LYP geometry)

75 vibrational modes; imaginary modes negative. Shift = ωB97X − B3LYP; height = B3LYP band height (km/mol).

The B3LYP bands are drawn in the spectrum above; the table adds their heights, the ωB97X positions and the shift.

#B3LYP (cm⁻¹)height (km/mol)ωB97X (cm⁻¹)shift
129.50.0562.0+32.5
261.40.0682.0+20.7
3101.70.66110.2+8.5
4117.50.34124.3+6.8
5137.80.01150.3+12.6
6233.01.35238.7+5.7
7243.90.43252.4+8.4
8246.81.16255.4+8.6
9283.51.46287.6+4.1
10357.60.94367.7+10.1
11394.50.53400.1+5.6
12420.81.54425.2+4.4
13429.00.27439.1+10.1
14440.44.32451.2+10.8
15471.55.11477.0+5.5
16510.80.69517.8+7.1
17526.11.39530.1+4.1
18549.30.31556.4+7.1
19573.41.58583.1+9.7
20578.71.15585.5+6.8
21610.414.37614.3+4.0
22640.45.20644.4+4.0
23661.17.90671.4+10.3
24721.55.40725.8+4.2
25727.70.12737.0+9.3
26732.93.82741.1+8.2
27762.930.35773.6+10.7
28769.61.51777.0+7.4
29802.70.78817.7+15.0
30815.21.69827.9+12.8
31860.451.29875.2+14.8
32880.710.20888.2+7.5
33885.28.08905.4+20.2
34896.13.66906.2+10.2
35911.711.67931.9+20.2
36949.13.37980.5+31.4
37957.41.47984.7+27.2
38977.60.021010.5+32.9
39989.80.001019.8+30.0
401036.029.431044.8+8.7
411070.95.451081.7+10.8
421102.258.931109.0+6.9
431128.219.011137.9+9.7
441181.726.251170.5-11.2
451182.2254.781186.9+4.7
461190.01.671203.9+13.9
471198.823.211207.2+8.4
481211.1153.771220.4+9.3
491238.416.321237.8-0.6
501253.71.101262.2+8.5
511272.918.671283.5+10.6
521307.4100.751314.2+6.8
531320.485.511335.5+15.1
541352.1235.811361.3+9.2
551385.50.921370.4-15.1
561404.226.401406.5+2.3
571449.322.471464.2+14.9
581475.41.931488.6+13.2
591475.811.841491.9+16.0
601503.51.661519.3+15.8
611561.94.261589.0+27.1
621574.31.231601.8+27.5
631622.30.401655.6+33.3
641665.42.141694.5+29.2
651677.50.311717.9+40.5
661682.111.741727.3+45.2
673179.50.323223.7+44.2
683182.33.193225.3+43.0
693189.86.343232.8+43.0
703192.16.673235.2+43.1
713199.532.113242.0+42.5
723207.334.993250.5+43.2
733216.07.213258.6+42.6
743217.115.563261.6+44.6
753246.83.213293.0+46.2

Second route

Analytic Hessian (pyscf, grid 99/590) against the corpus finite differences: b3lyp max |Δω| 42 cm⁻¹; wb97x max |Δω| 7 cm⁻¹.

Provenance

  • Releases: layerA2_2026-09-23, layerA2_2026-09-23b, layerA2_2026-09-24
  • Entered the corpus as: substituted three- and four-ring cores, enumerated from the parents (layer A′) (layer A2)
  • Run: ubuntu-32gb-hel1-9, 2026-09-21 03:30:51 → 2026-09-21 05:36:04, 7513 s, peak 6.95 GB, deck 97ed2d67c66b
  • Imaginary modes: B3LYP 0, ωB97X 0
  • Cheap-level band heights: dipole derivatives dipole_b3lyp_cphf.npz, Hessian hessian_b3lyp.npz
  • Source files: corpus factory · manifest