phenanthridine+CH3 C14H11N
A2_14dee3bc02 · SMILES Cc1cccc2c1ncc1ccccc12 · InChIKey NNEKGIHCUCBTHT-UHFFFAOYSA-N
finite-difference Hessian noisy
finite-difference Hessian noisy (analytic check differs > 15 cm⁻¹). The finite-difference Hessian and the analytic Hessian of the same geometry differ by more than 15 cm⁻¹ on at least one frequency; the numerical route is the noisy one.Infrared spectrum at the cheap level (B3LYP/6-31G*, the pipeline's input)
How to read this
57 infrared-active bands (500–3500 cm⁻¹); the strongest at 770 cm⁻¹ (13.0 µm), 65 km/mol.
cheap input (B3LYP): blue curve, sticks orange at the curve's peak scale. Lorentzian, FWHM 10 cm⁻¹; axis in km mol⁻¹ per cm⁻¹.
Band heights from the molecule's dipole derivatives and the same B3LYP Hessian as the listed positions (double harmonic).
Predicted spectrum (rung 3, the learned correction): computed by the pipeline, not drawn on this page; licensed for ring-ip, CH-stretch, CH-oop (decision 65).
How well is this shape known?
| measured on (ΔH network v1.3) | spectrum overlap cheap → corrected | height error cheap → corrected |
|---|---|---|
| 8 unseen simple aromatics (layer A), DFT stand-in for the higher level | 0.28 → 0.98 | 0.23 → 0.10 |
| 31 molecules of unseen scaffolds, DFT stand-in for the higher level | 0.37 → 0.97 | 0.51 → 0.24 |
| against coupled cluster | not measured for this version | |
Overlap: similarity of the two broadened spectra (1 = the same shape). Height error: relative error per band, weighted by height (0 = the same heights). "Corrected" is the learned correction on molecules it never saw; the pipeline serves it for the licensed families. Open: the dipole derivatives themselves are computed at the cheap level (on benzene they differ from coupled cluster by about 20 %).
Harmonic frequencies at the cheap level (deck v1: B3LYP and ωB97X, 6-31G*, at the B3LYP geometry)
72 vibrational modes; imaginary modes negative. Shift = ωB97X − B3LYP; height = B3LYP band height (km/mol).
The B3LYP bands are drawn in the spectrum above; the table adds their heights, the ωB97X positions and the shift.
| # | B3LYP (cm⁻¹) | height (km/mol) | ωB97X (cm⁻¹) | shift |
|---|---|---|---|---|
| 1 | 73.9 | 0.45 | 86.8 | +12.8 |
| 2 | 101.8 | 0.74 | 118.5 | +16.7 |
| 3 | 125.8 | 0.38 | 157.8 | +32.0 |
| 4 | 196.4 | 0.52 | 207.4 | +11.0 |
| 5 | 216.6 | 1.11 | 222.9 | +6.3 |
| 6 | 242.1 | 0.01 | 254.2 | +12.1 |
| 7 | 264.2 | 2.59 | 273.1 | +8.9 |
| 8 | 310.9 | 0.49 | 314.7 | +3.7 |
| 9 | 422.0 | 0.03 | 428.9 | +6.9 |
| 10 | 423.8 | 0.24 | 436.1 | +12.3 |
| 11 | 466.8 | 0.02 | 472.4 | +5.6 |
| 12 | 484.8 | 0.70 | 495.9 | +11.1 |
| 13 | 509.4 | 0.73 | 520.2 | +10.8 |
| 14 | 521.6 | 6.58 | 525.1 | +3.5 |
| 15 | 539.1 | 0.97 | 545.2 | +6.1 |
| 16 | 588.0 | 2.92 | 598.1 | +10.1 |
| 17 | 596.8 | 2.45 | 601.7 | +4.8 |
| 18 | 616.6 | 1.83 | 631.5 | +14.9 |
| 19 | 679.9 | 0.57 | 686.4 | +6.5 |
| 20 | 731.5 | 7.97 | 736.6 | +5.1 |
| 21 | 745.3 | 0.27 | 761.6 | +16.3 |
| 22 | 770.3 | 65.15 | 781.7 | +11.4 |
| 23 | 781.1 | 14.02 | 793.9 | +12.8 |
| 24 | 830.3 | 0.56 | 844.1 | +13.8 |
| 25 | 836.9 | 0.49 | 846.8 | +9.9 |
| 26 | 880.1 | 0.43 | 902.0 | +21.9 |
| 27 | 893.9 | 1.87 | 902.6 | +8.7 |
| 28 | 901.6 | 2.66 | 914.6 | +13.0 |
| 29 | 903.1 | 11.54 | 927.2 | +24.1 |
| 30 | 942.5 | 2.36 | 970.8 | +28.3 |
| 31 | 960.6 | 2.63 | 990.0 | +29.4 |
| 32 | 973.1 | 3.77 | 1001.6 | +28.5 |
| 33 | 991.8 | 0.07 | 1023.0 | +31.2 |
| 34 | 1023.9 | 1.47 | 1029.6 | +5.8 |
| 35 | 1062.2 | 2.07 | 1072.0 | +9.8 |
| 36 | 1078.5 | 2.88 | 1084.4 | +5.8 |
| 37 | 1097.0 | 0.86 | 1106.9 | +9.9 |
| 38 | 1117.0 | 3.85 | 1117.0 | +0.0 |
| 39 | 1166.6 | 4.44 | 1164.9 | -1.7 |
| 40 | 1196.9 | 0.67 | 1192.5 | -4.4 |
| 41 | 1212.6 | 1.70 | 1213.3 | +0.7 |
| 42 | 1222.8 | 2.10 | 1225.4 | +2.6 |
| 43 | 1266.9 | 0.98 | 1274.5 | +7.6 |
| 44 | 1281.1 | 15.90 | 1293.7 | +12.6 |
| 45 | 1300.5 | 1.11 | 1308.0 | +7.4 |
| 46 | 1330.0 | 1.04 | 1323.9 | -6.1 |
| 47 | 1378.0 | 4.85 | 1372.8 | -5.2 |
| 48 | 1394.2 | 5.17 | 1392.7 | -1.5 |
| 49 | 1425.6 | 0.41 | 1432.8 | +7.1 |
| 50 | 1439.8 | 2.28 | 1451.3 | +11.6 |
| 51 | 1446.6 | 0.58 | 1460.3 | +13.7 |
| 52 | 1489.3 | 5.32 | 1502.6 | +13.4 |
| 53 | 1505.2 | 5.22 | 1512.2 | +7.0 |
| 54 | 1509.3 | 3.14 | 1523.4 | +14.1 |
| 55 | 1521.5 | 22.33 | 1532.6 | +11.0 |
| 56 | 1538.2 | 10.76 | 1563.6 | +25.5 |
| 57 | 1580.5 | 17.98 | 1609.3 | +28.8 |
| 58 | 1631.0 | 0.26 | 1666.2 | +35.3 |
| 59 | 1646.0 | 21.62 | 1680.7 | +34.7 |
| 60 | 1660.8 | 7.82 | 1698.3 | +37.5 |
| 61 | 1673.3 | 13.77 | 1717.4 | +44.1 |
| 62 | 3057.5 | 30.59 | 3092.2 | +34.8 |
| 63 | 3115.7 | 12.91 | 3166.0 | +50.3 |
| 64 | 3130.2 | 25.78 | 3177.8 | +47.6 |
| 65 | 3133.0 | 26.61 | 3179.0 | +46.0 |
| 66 | 3180.2 | 7.86 | 3223.8 | +43.6 |
| 67 | 3181.4 | 5.05 | 3224.6 | +43.2 |
| 68 | 3190.3 | 13.59 | 3233.6 | +43.4 |
| 69 | 3195.2 | 28.54 | 3238.7 | +43.4 |
| 70 | 3206.3 | 5.68 | 3249.7 | +43.4 |
| 71 | 3211.3 | 30.28 | 3254.8 | +43.6 |
| 72 | 3222.2 | 26.54 | 3266.7 | +44.6 |
Second route
Analytic Hessian (pyscf, grid 99/590) against the corpus finite differences: b3lyp max |Δω| 1 cm⁻¹; wb97x max |Δω| 16 cm⁻¹.
Provenance
- Releases: layerA2_2026-09-23, layerA2_2026-09-23b, layerA2_2026-09-24
- Entered the corpus as: substituted three- and four-ring cores, enumerated from the parents (layer A′) (layer A2)
- Run: ubuntu-32gb-hel1-11, 2026-09-21 00:44:52 → 2026-09-21 02:14:37, 5384 s, peak 5.77 GB, deck 97ed2d67c66b
- Imaginary modes: B3LYP 0, ωB97X 0
- Cheap-level band heights: dipole derivatives dipole_b3lyp_cphf.npz, Hessian hessian_b3lyp.npz
- Source files: corpus factory · manifest